Dark Energy Spectroscopic Survey [DESpec] » Simulation Pipeline

I fixed some obvious bugs in Cosmo (incorrect archive addresses). Now this surfaced:

Config Structure not supplied. Going to paramfile ...
('Omega_m = ', 0.3)
('Omega_l = ', 0.6999152476484926)
('h = ', 0.7)
('n = ', 1.0)
('w_0 = ', -0.95)
('w_a = ', 0.0)
Config Structure not supplied. Going to paramfile ...
('Omega_m = ', 0.3)
('Omega_l = ', 0.6999152476484926)
('h = ', 0.7)
('n = ', 1.0)
('w_0 = ', -0.95)
('w_a = ', 0.0)
CORRELATED CASE
----------------------------------------------------------------------------
IndexError                                Traceback (most recent call last)
/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/IPython/utils/py3compat.pyc in execfile(fname, *where)
    176             else:
    177                 filename = fname
--> 178             __builtin__.execfile(filename, *where)

/Users/ben/Documents/DESpec/repo/despec/10-EstimateCosmologyParameters/EstimateCosmologyParameters_Nicola/EstimateCosmologyParameters.py in <module>()
    195 
    196 print("CORRELATED CASE")
--> 197 fisher_matrix_corr, fisher_matrix_red = fiducial.fisher_corr(param_list1, param_list2, no_of_bins, l_max, n_param, f_sky, n_A, survey)
    198 fisher_matrix_corr = fisher_matrix_corr[:, [0,1,2,3,4,5]] # Changed (AN) June 20, 2013: Marginalise over power spectrum amplitude
    199 fisher_matrix_corr = fisher_matrix_corr[[0,1,2,3,4,5], :]

/Users/ben/Documents/DESpec/repo/despec/10-EstimateCosmologyParameters/EstimateCosmologyParameters_Nicola/PyCosmo_params.py in fisher_corr(self, param_list1, param_list2, no_of_bins, l_max, n_param, f_sky, n_A, survey)
    682                 normalisation = 0
    683                 for i in range(1, no_of_bins+1):
--> 684                         normalisation = normalisation + scipy.integrate.quad(lambda x: self.W_Bin_true_tab(i-1, numpy.ones(no_of_bins), survey, z=x), bin_edge[2*i-2], bin_edge[2*i-1])[0]
    685                 delattr(self, 'W_Bin_true_interp_z')
    686 

/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy/integrate/quadpack.pyc in quad(func, a, b, args, full_output, epsabs, epsrel, limit, points, weight, wvar, wopts, maxp1, limlst)
    246     if type(args) != type(()): args = (args,)
    247     if (weight is None):
--> 248         retval = _quad(func,a,b,args,full_output,epsabs,epsrel,limit,points)
    249     else:
    250         retval = _quad_weight(func,a,b,args,full_output,epsabs,epsrel,limlst,limit,maxp1,weight,wvar,wopts)

/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy/integrate/quadpack.pyc in _quad(func, a, b, args, full_output, epsabs, epsrel, limit, points)
    311     if points is None:
    312         if infbounds == 0:
--> 313             return _quadpack._qagse(func,a,b,args,full_output,epsabs,epsrel,limit)
    314         else:
    315             return _quadpack._qagie(func,bound,infbounds,args,full_output,epsabs,epsrel,limit)

/Users/ben/Documents/DESpec/repo/despec/10-EstimateCosmologyParameters/EstimateCosmologyParameters_Nicola/PyCosmo_params.py in <lambda>(x)
    682                 normalisation = 0
    683                 for i in range(1, no_of_bins+1):
--> 684                         normalisation = normalisation + scipy.integrate.quad(lambda x: self.W_Bin_true_tab(i-1, numpy.ones(no_of_bins), survey, z=x), bin_edge[2*i-2], bin_edge[2*i-1])[0]
    685                 delattr(self, 'W_Bin_true_interp_z')
    686 

/Users/ben/Documents/DESpec/repo/despec/10-EstimateCosmologyParameters/EstimateCosmologyParameters_Nicola/PyCosmo_params.py in W_Bin_true_tab(self, bin_no, normalisations, survey, z)
    176                         self.W_Bin_true_interp_z = [0 for j in range(no_of_bins)]
    177                         for i in range(0, no_of_bins):
--> 178                                 self.W_Bin_true_interp_z[i] = interpolate.interp1d(bin_centers[i,:], true_hist[i, :]/normalisations[i], bounds_error=False, fill_value=0.)
    179                 return self.W_Bin_true_interp_z[bin_no](z)
    180 

IndexError: too many indices

Please fix.