cet-is » art

Attempting to use valgrind:

valgrind --log-file=valgrind.out --leak-check=no --track-origins=yes --num-callers=50 --suppressions=/products/root/v6_04_06/Linux64bit+2.6-2.12-e9-nu-prof/etc/root. lar -c ./test_optical_reco_dune35t.fcl 

valgrind log file available on woof at /home/garren/valgrind-12247.out

If 'twere me, I'd stop at Principal::getResolvedGroup() (Principal.cc:423) and step from there in a debugger. Something really hinky looks to be going on with the group search.

This may or may not help you -- if not, please ignore.
It is a backtrace in debug mode. It seems to point to the same direction, but a bit deeper.

%MSG-i PhotonLibrary: LArG4:largeant 12-Apr-2016 16:31:32 CDT run: 1 subRun: 0 event: 1
Photon lookup table size : 1000000 voxels, 8 channels
%MSG

Thread 1 "lar" received signal SIGSEGV, Segmentation fault.
0x00007ffff7d22af8 in std::type_info::operator== (this=0x7fffccf82820 <typeinfo for art::Wrapper<art::Assns<recob::OpFlash, recob::OpHit, void> >>, __arg=...)
at /scratch/workspace/nu-release-build/v1_25_00/s31-e9/debug/build/gcc/v4_9_3/Linux64bit+2.6-2.12/include/c++/4.9.3/typeinfo:122
122 /scratch/workspace/nu-release-build/v1_25_00/s31-e9/debug/build/gcc/v4_9_3/Linux64bit+2.6-2.12/include/c++/4.9.3/typeinfo: No such file or directory.

(gdb) bt
#0 0x00007ffff7d22af8 in std::type_info::operator== (this=0x7fffccf82820 <typeinfo for art::Wrapper<art::Assns<recob::OpFlash, recob::OpHit, void> >>, __arg=...)
at /scratch/workspace/nu-release-build/v1_25_00/s31-e9/debug/build/gcc/v4_9_3/Linux64bit+2.6-2.12/include/c++/4.9.3/typeinfo:122
#1 0x00007ffff19942e1 in art::TypeID::operator== (this=0x20847468, rhs=...) at /scratch/workspace/nu-release-build/v1_25_00/s31-e9/debug/build/art/v1_18_05/src/art/Utilities/TypeID.h:121
#2 0x00007ffff1993f2f in art::AssnsGroup::uniqueProduct (this=0x20847460, wanted_wrapper_type=...)
at /scratch/workspace/nu-release-build/v1_25_00/s31-e9/debug/build/art/v1_18_05/src/art/Framework/Principal/AssnsGroup.cc:90
#3 0x00007ffff1993f94 in art::AssnsGroup::resolveProductIfAvailable (this=0x20847460, fillOnDemand=false, wanted_wrapper_type=...)
at /scratch/workspace/nu-release-build/v1_25_00/s31-e9/debug/build/art/v1_18_05/src/art/Framework/Principal/AssnsGroup.cc:131
#4 0x00007ffff19b0d1f in art::Principal::getResolvedGroup (this=0x6683d80, bid=..., resolveProd=true, fillOnDemand=false)
at /scratch/workspace/nu-release-build/v1_25_00/s31-e9/debug/build/art/v1_18_05/src/art/Framework/Principal/Principal.cc:427
#5 0x00007ffff19b081d in art::Principal::getForOutput (this=0x6683d80, bid=..., resolveProd=true)
at /scratch/workspace/nu-release-build/v1_25_00/s31-e9/debug/build/art/v1_18_05/src/art/Framework/Principal/Principal.cc:383
#6 0x00007ffff482a8f9 in art::RootOutputFile::fillBranches (this=0x1ee02c60, bt=@0x7ffffffec09c: art::InEvent, principal=..., vpp=0x1ee02d20)
at /scratch/workspace/nu-release-build/v1_25_00/s31-e9/debug/build/art/v1_18_05/src/art/Framework/IO/Root/RootOutputFile.cc:700
#7 0x00007ffff48285b9 in art::RootOutputFile::writeOne (this=0x1ee02c60, e=...)
at /scratch/workspace/nu-release-build/v1_25_00/s31-e9/debug/build/art/v1_18_05/src/art/Framework/IO/Root/RootOutputFile.cc:298
#8 0x00007fffde2dcdc4 in art::RootOutput::write (this=0x4a86670, ep=...)
at /scratch/workspace/nu-release-build/v1_25_00/s31-e9/debug/build/art/v1_18_05/src/art/Framework/IO/Root/RootOutput_module.cc:365

For posterity: command used to ascertain missing partner dictionary selections:

sort -u lardata/lardata/RecoBase/classes_def.xml | \
grep -e 'Wrapper.*Assns' | \
perl -wane 'BEGIN { @h = (); }
m&.*Wrapper.*Assns\s*<(\S+?),\s*(\S+?)(?:,\s*(\S+?))?\s*>& and
 push @h, [ ${1}, ${2}, ${3} || "void" ];
END { foreach my $f (@h) {
 grep { $_->[0] eq $f->[1] and
  $_->[1] eq $f->[0] and $_->[2] eq $f->[2]; } @h or 
   print "Missing selections for art::Assns<$f->[1], $f->[0], $f->[2]>\n";
 }; }'

At this time the dune test passes, but production.sh still fails, but in a different place. Investigating.

There were more missing enums in the dictionaries. Once those were resolved, all tests pass.